Transimulation

PROTEIN BIOSYNTHESIS SERVER

The service for simulating translation of individual genes in three model organisms, that:

- estimates mean initiation and elongation time in SI units,
- approximates the number of proteins produced from a transcript,
- simulates ribosome propagation on a transcript and allows modifying its sequence on the fly,
- enables uploading any coding sequence and simulating its translation in one of the three host organisms,
- provides easy access to all information via online GUI or flat files download.

The simulation is based on several experimental data sets described in detail here , and a computational model of translation described here.