Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Escherichia coli
Share
Back
Gene Id:
b0876
Other IDs:
ybjD; GI:16128844
Gene Description:
conserved protein with nucleoside triphosphate hydrolase domain
ORF length [codons] - L:
553
transcripts per cell - x:
0.58
number of proteins produced from a single transcript during its lifespan - b:
21.42
ribosome density in number of ribosomes per 100 codons - g:
0.838
number of ribosomes attached to a single transcript - w:
4.63
translation initiation time [s] - I:
14.90
translation elongation time [s] - E:
69.30
mean codon elongation time [ms] - ē:
125.00
transcript mean lifetime [hh:mm:ss] - m:
0:05:20
View ribosome speed plots
for the original sequence