Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Escherichia coli
Share
Back
Gene Id:
b0997
Other IDs:
torA; GI:16128963
Gene Description:
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit
ORF length [codons] - L:
849
transcripts per cell - x:
1.27
number of proteins produced from a single transcript during its lifespan - b:
0.43
ribosome density in number of ribosomes per 100 codons - g:
0.009
number of ribosomes attached to a single transcript - w:
0.08
translation initiation time [s] - I:
1276.90
translation elongation time [s] - E:
98.30
mean codon elongation time [ms] - ē:
116.00
transcript mean lifetime [hh:mm:ss] - m:
0:09:05
View ribosome speed plots
for the original sequence