Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Escherichia coli
Share
Back
Gene Id:
b2211
Other IDs:
yojI; GI:16130148
Gene Description:
Microcin J25 efflux pump, TolC-dependent; fused ABC transporter permease and ATP-binding components
ORF length [codons] - L:
548
transcripts per cell - x:
0.64
number of proteins produced from a single transcript during its lifespan - b:
38.71
ribosome density in number of ribosomes per 100 codons - g:
1.334
number of ribosomes attached to a single transcript - w:
7.31
translation initiation time [s] - I:
8.50
translation elongation time [s] - E:
62.10
mean codon elongation time [ms] - ē:
113.00
transcript mean lifetime [hh:mm:ss] - m:
0:05:28
View ribosome speed plots
for the original sequence