Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Saccharomyces cerevisiae
Share
Back
Gene Id:
YER144C
Other IDs:
UBP5; SGDID:S000000946
Gene Description:
Putative ubiquitin-specific protease, closest paralog of Doa4p but has no functional overlap; concentrates at the bud nec; Verified ORF.
ORF length [codons] - L:
806
transcripts per cell - x:
0.60
number of proteins produced from a single transcript during its lifespan - b:
58.43
ribosome density in number of ribosomes per 100 codons - g:
0.579
number of ribosomes attached to a single transcript - w:
4.67
translation initiation time [s] - I:
43.00
translation elongation time [s] - E:
200.50
mean codon elongation time [ms] - ē:
249.00
transcript mean lifetime [hh:mm:ss] - m:
0:41:50
View ribosome speed plots
for the original sequence
Include delays at 6 position