Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Saccharomyces cerevisiae
Share
Back
Gene Id:
YFR002W
Other IDs:
NIC96; SGDID:S000001898
Gene Description:
Component of the nuclear pore complex, required for nuclear pore formation; forms a subcomplex with Nsp1p, Nup57p, and Nup49; Verified ORF.
ORF length [codons] - L:
840
transcripts per cell - x:
3.11
number of proteins produced from a single transcript during its lifespan - b:
None
ribosome density in number of ribosomes per 100 codons - g:
0.977
number of ribosomes attached to a single transcript - w:
8.20
translation initiation time [s] - I:
22.50
translation elongation time [s] - E:
184.50
mean codon elongation time [ms] - ē:
220.00
transcript mean lifetime [hh:mm:ss] - m:
None
View ribosome speed plots
for the original sequence
Include delays at 6 position