Transimulation

Gene Id:

YHR079C

Other IDs:

IRE1; SGDID:S000001121

Gene Description:

Serine-threonine kinase and endoribonuclease; transmembrane protein that mediates the unfolded protein response (UPR) by regulating Hac1p synthesis through HAC1 mRNA splicing; Kar2p binds inactive Ire1p and releases from it upon ER stres; Verified ORF.

ORF length [codons] - L:

1116

transcripts per cell - x:

0.64

number of proteins produced from a single transcript during its lifespan - b:

22.26

ribosome density in number of ribosomes per 100 codons - g:

0.631

number of ribosomes attached to a single transcript - w:

7.04

translation initiation time [s] - I:

38.90

translation elongation time [s] - E:

273.70

mean codon elongation time [ms] - ē:

245.00

transcript mean lifetime [hh:mm:ss] - m:

0:14:25

Transimulation

PROTEIN BIOSYNTHESIS SERVER

View ribosome speed plots

Include delays at 6 position