Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Saccharomyces cerevisiae
Share
Back
Gene Id:
YLR397C
Other IDs:
AFG2; SGDID:S000004389
Gene Description:
ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; may be involved in degradation of aberrant mRNA; Verified ORF.
ORF length [codons] - L:
781
transcripts per cell - x:
1.94
number of proteins produced from a single transcript during its lifespan - b:
79.41
ribosome density in number of ribosomes per 100 codons - g:
1.02
number of ribosomes attached to a single transcript - w:
7.97
translation initiation time [s] - I:
22.90
translation elongation time [s] - E:
182.40
mean codon elongation time [ms] - ē:
234.00
transcript mean lifetime [hh:mm:ss] - m:
0:30:17
View ribosome speed plots
for the original sequence
Include delays at 6 position