Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Saccharomyces cerevisiae
Share
Back
Gene Id:
YPR065W
Other IDs:
ROX1; SGDID:S000006269
Gene Description:
Heme-dependent repressor of hypoxic genes; contains an HMG domain that is responsible for DNA bending activit; Verified ORF.
ORF length [codons] - L:
369
transcripts per cell - x:
1.01
number of proteins produced from a single transcript during its lifespan - b:
None
ribosome density in number of ribosomes per 100 codons - g:
3.708
number of ribosomes attached to a single transcript - w:
13.68
translation initiation time [s] - I:
6.70
translation elongation time [s] - E:
91.50
mean codon elongation time [ms] - ē:
248.00
transcript mean lifetime [hh:mm:ss] - m:
None
View ribosome speed plots
for the original sequence
Include delays at 6 position