Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Saccharomyces cerevisiae
Share
Back
Gene Id:
YBR176W
Other IDs:
ECM31; SGDID:S000000380
Gene Description:
Ketopantoate hydroxymethyltransferase, required for pantothenic acid biosynthesis, converts 2-oxoisovalerate into 2-dehydropantoat; Verified ORF.
ORF length [codons] - L:
313
transcripts per cell - x:
3.36
number of proteins produced from a single transcript during its lifespan - b:
None
ribosome density in number of ribosomes per 100 codons - g:
0.47
number of ribosomes attached to a single transcript - w:
1.47
translation initiation time [s] - I:
49.10
translation elongation time [s] - E:
72.30
mean codon elongation time [ms] - ē:
231.00
transcript mean lifetime [hh:mm:ss] - m:
None
View ribosome speed plots
for the original sequence
Include delays at 6 position