Home
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
Upload sequence
Escherichia coli
Saccharomyces cerevisiae
Homo sapiens
With codon elongation times [ms]
Download
HOW TO
- search and browse the database
- run simulation
- upload sequence
- mirror this server
- cite
Transimulation
PROTEIN BIOSYNTHESIS SERVER
Saccharomyces cerevisiae
Share
Back
Gene Id:
YDR414C
Other IDs:
ERD1; SGDID:S000002822
Gene Description:
Predicted membrane protein required for the retention of lumenal endoplasmic reticulum proteins; mutants secrete the endogenous ER protein, BiP (Kar2p; Verified ORF.
ORF length [codons] - L:
363
transcripts per cell - x:
2.15
number of proteins produced from a single transcript during its lifespan - b:
None
ribosome density in number of ribosomes per 100 codons - g:
0.48
number of ribosomes attached to a single transcript - w:
1.74
translation initiation time [s] - I:
53.50
translation elongation time [s] - E:
93.20
mean codon elongation time [ms] - ē:
257.00
transcript mean lifetime [hh:mm:ss] - m:
None
View ribosome speed plots
for the original sequence
Include delays at 6 position